TY - JOUR
T1 - A genome-wide association study suggests correlations of common genetic variants with peritoneal solute transfer rates in patients with kidney failure receiving peritoneal dialysis
AU - Bio-PD Consortium
AU - Mehrotra, Rajnish
AU - Stanaway, Ian B.
AU - Jarvik, Gail P.
AU - Lambie, Mark
AU - Morelle, Johann
AU - Perl, Jeffrey
AU - Himmelfarb, Jonathan
AU - Heimburger, Olof
AU - Johnson, David W.
AU - Imam, Talha H.
AU - Robinson, Bruce
AU - Stenvinkel, Peter
AU - Devuyst, Olivier
AU - Davies, Simon J.
AU - Pisoni, Ronald
AU - Cho, Yeoungjee
AU - Wong, Muh Geot
AU - Mather, Amanda
AU - Cooper, Bruce
AU - Goffin, Eric
AU - Bammens, Bert
AU - Bovy, Philippe
AU - Margetts, Peter
AU - Taylor, Paul
AU - Jain, Arsh
AU - Jassal, Vanita
AU - Kuan, Ying
AU - Harron, Camille
AU - Dasgupta, Indranil
AU - Stoves, John
AU - Akbani, Habib
AU - Abeygunasekara, Sumith
AU - Sharples, Edward
AU - Mead, Paul
AU - Hayat, Amer
AU - Morgan, Neal
AU - Cramp, Hilary
AU - Robertson, Susan
AU - Fielding, Richard
AU - Brown, Edwina
AU - Collinson, Helen
AU - Ande, Pravene
AU - Doulton, Tim
AU - MacDougall, Iain
AU - Cairns, Hugh
AU - Vilar, Enric
AU - Vardhan, Anand
AU - Chess, James
AU - Sandhu, Kanwaljit
AU - Chandrasekar, Thangavelu
N1 - Publisher Copyright:
© 2021 International Society of Nephrology
PY - 2021/11
Y1 - 2021/11
N2 - Movement of solutes across the peritoneum allows for the use of peritoneal dialysis to treat kidney failure. However, there is a large inter-individual variability in the peritoneal solute transfer rate (PSTR). Here, we tested the hypothesis that common genetic variants are associated with variability in PSTR. Of the 3561 participants from 69 centers in six countries, 2850 with complete data were included in a genome-wide association study. PSTR was defined as the four-hour dialysate/plasma creatinine ratio from the first peritoneal equilibration test after starting PD. Heritability of PSTR was estimated using genomic-restricted maximum-likelihood analysis, and the association of PSTR with a genome-wide polygenic risk score was also tested. The mean four-hour dialysate/plasma creatinine ratio in participants was 0.70. In 2212 participants of European ancestry, no signal reached genome-wide significance but 23 single nucleotide variants at four loci demonstrated suggestive associations with PSTR. Meta-analysis of ancestry-stratified regressions in 2850 participants revealed five single-nucleotide variants at four loci with suggestive correlations with PSTR. Association across ancestry strata was consistent for rs28644184 at the KDM2B locus. The estimated heritability of PSTR was 19%, and a permuted model polygenic risk score was significantly associated with PSTR. Thus, this genome-wide association study of patients receiving peritoneal dialysis bolsters evidence for a genetic contribution to inter-individual variability in PSTR.
AB - Movement of solutes across the peritoneum allows for the use of peritoneal dialysis to treat kidney failure. However, there is a large inter-individual variability in the peritoneal solute transfer rate (PSTR). Here, we tested the hypothesis that common genetic variants are associated with variability in PSTR. Of the 3561 participants from 69 centers in six countries, 2850 with complete data were included in a genome-wide association study. PSTR was defined as the four-hour dialysate/plasma creatinine ratio from the first peritoneal equilibration test after starting PD. Heritability of PSTR was estimated using genomic-restricted maximum-likelihood analysis, and the association of PSTR with a genome-wide polygenic risk score was also tested. The mean four-hour dialysate/plasma creatinine ratio in participants was 0.70. In 2212 participants of European ancestry, no signal reached genome-wide significance but 23 single nucleotide variants at four loci demonstrated suggestive associations with PSTR. Meta-analysis of ancestry-stratified regressions in 2850 participants revealed five single-nucleotide variants at four loci with suggestive correlations with PSTR. Association across ancestry strata was consistent for rs28644184 at the KDM2B locus. The estimated heritability of PSTR was 19%, and a permuted model polygenic risk score was significantly associated with PSTR. Thus, this genome-wide association study of patients receiving peritoneal dialysis bolsters evidence for a genetic contribution to inter-individual variability in PSTR.
KW - epithelial mesenchymal transition
KW - genetics
KW - genome-wide association study
KW - kidney failure
KW - peritoneal dialysis
KW - peritoneal solute transfer rate
UR - https://www.scopus.com/pages/publications/85120720327
U2 - 10.1016/j.kint.2021.05.037
DO - 10.1016/j.kint.2021.05.037
M3 - Article
C2 - 34197840
AN - SCOPUS:85120720327
SN - 0085-2538
VL - 100
SP - 1101
EP - 1111
JO - Kidney International
JF - Kidney International
IS - 5
ER -