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20222026

Research activity per year

Personal profile

Expertise related to UN Sustainable Development Goals

In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being
  2. SDG 4 - Quality Education
    SDG 4 Quality Education
  3. SDG 9 - Industry, Innovation, and Infrastructure
    SDG 9 Industry, Innovation, and Infrastructure

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Collaborations and top research areas from the last five years

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  • A tri-modal contrastive learning framework for protein representation learning

    Zhang, L., Guo, H., Schaffer, L., Ko, Y. S., Singh, D., Rahmani, H., Grotjahn, D., Villa, E., Gilson, M., Wang, W., Ideker, T., Xing, E. & Xie, P., 2026, (Accepted/In press) In: Cell Reports Methods. 101407.

    Research output: Contribution to journalArticlepeer-review

    Open Access
  • scLong: a billion-parameter foundation model for capturing long-range gene context in single-cell transcriptomics

    Bai, D., Mo, S., Zhang, R., Luo, Y., Gao, J., Yang, J. P., Wu, Q., Rahmani, H., Amariuta, T., Grotjahn, D., Zhong, S., Lewis, N., Wang, W., Ideker, T., Xie, P. & Xing, E., Dec 2026, In: Nature Communications. 17, 1, 2380.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    1 Scopus citations
  • A call for built-in biosecurity safeguards for generative AI tools

    Wang, M., Zhang, Z., Bedi, A. S., Velasquez, A., Guerra, S., Lin-Gibson, S., Cong, L., Qu, Y., Chakraborty, S., Blewett, M., Ma, J., Xing, E. & Church, G., Jun 2025, In: Nature Biotechnology. 43, 6, p. 845-847 3 p.

    Research output: Contribution to journalLetterpeer-review

    13 Scopus citations
  • Deep phenotyping of health–disease continuum in the Human Phenotype Project

    Reicher, L., Shilo, S., Godneva, A., Lutsker, G., Zahavi, L., Shoer, S., Krongauz, D., Rein, M., Kohn, S., Segev, T., Schlesinger, Y., Barak, D., Levine, Z., Keshet, A., Shaulitch, R., Lotan-Pompan, M., Elkan, M., Talmor-Barkan, Y., Aviv, Y. & Dadiani, M. & 18 others, Tsodyks, Y., Gal-Yam, E. N., Leibovitzh, H., Werner, L., Tzadok, R., Maharshak, N., Koga, S., Glick-Gorman, Y., Stossel, C., Raitses-Gurevich, M., Golan, T., Dhir, R., Reisner, Y., Weinberger, A., Rossman, H., Song, L., Xing, E. P. & Segal, E., Sep 2025, In: Nature Medicine. 31, 9, p. 3191-3203 13 p.

    Research output: Contribution to journalArticlepeer-review

    21 Scopus citations
  • AttentionPert: accurately modeling multiplexed genetic perturbations with multi-scale effects

    Bai, D., Ellington, C. N., Mo, S., Song, L. & Xing, E. P., 1 Jul 2024, In: Bioinformatics. 40, p. i453-i461

    Research output: Contribution to journalArticlepeer-review

    Open Access
    8 Scopus citations